Invited articles
41. Machida, C., Nakagawa, A., Kojima, S.,
Takahashi, H. and Machida, Y.: The complex of ASYMMETRIC LEAVES (AS) proteins
plays a central role in antagonistic interactions of genes for leaf polarity
specification in Arabidopsis. Wiley Interdiscip Rev Dev Biol.
2015 Nov-Dec;4(6):655-71. doi: 10.1002/wdev.196.
Epub 2015 Jun 24. Review.
40. Ito, M. and Machida, Y.: Reprogramming of plant cells induced by 6b oncoproteins from the plant pathogen Agrobacterium. J. Plant Res. 128, 423-435 (2015) [Epub ahead of print on Feb 19, 2015]. doi: 10.1007/s10265-014-0694-3.
39. Ishibashi, N. and Machida, Y.: Protein encoded by oncogene 6b from Agrobacterium tumefaciens has reprogramming potential and histone chaperone-like activity. In Progress of creal genome engineering mediated by Agrobacterium tumefaciens: Frontiers in PLANT SCIENCE (ed. by Seiichiro Toki & Toshihiko Komari), 28 October (2014), vol. 5, Article 572, p1-7, doi: 10.3389/fpls.2014.00572
38. Sasabe, M. and Machida,
Y.: Signaling pathway that controls plant cytokinesis. In Signalling Pathways
in Plants: ed. by Yasunori Machida, Chentao Lin & Fuyuhiko Tamanoi,
THE ENZYMES, vol. 35, Burlington: Academic Press (2014), pp.
145-165. http://dx.doi.org/10.1016/B978-0-12-801922-1.00006-3
37. Sasabe
M and Machida Y.: Regulation of Organization and Function of Microtubules
by the itogen-Activated Protein Kinase Cascade During Plant Cytokinasis.
Cytoskeleton 69(11), 913-918（2012）
36. Sasabe, M. and Machida,
Y.: Signaling by protein phosphorylation in cell division. In Annual
Plant Reviews, Vol. 33( ed. by Zenbiyao Yang, Blackwell) p336-361 (2008)
35. Suzuki, T. and Machida,
Y,: MAP kinase cascades that control cell division, plant growth and development.
In Plant Growth Signaling, Plant Cell Monographs (ed, Laci Bogre) Springer-Verlag
Berlin Heidelberg, p261-275 (2008)
34. Sasabe, M. and Machida,
Y.: MAP kinase signaling during M phase progression. In Cell division
Control in Plants. Plant Cell Monographs (ed, D. P. S. Verma and Z. Hong)
Springer-Verlag Berlin Heidelberg, p233-250 (2007)
33. Sasabe, M. and Machida,
Y.: MAP65: a bridge linking a MAP kinase to microtubule turnover. Curr.
Opin. Plant Biol. 9, 563-570 (2006)
32. Sasabe, M., Takahashi,
Y., Soyano, T., Tanaka, H., Kousetsu, K., Suzuki, T., and Machida, Y.:
The NACK-PQR MAP kinase cascade controls plant cytokinesis. in Biotechnology
in Agriculture and Forestry, Vol. 58, Tobacco BY-2 Cells: From Cellular
Dynamics to Omics (ed, T. Nagata, K. Matsuoka and D. Inz��, p79-94, Springer-Verlag
Berlin Heidelberg (2006)
31. Tanaka, H., and Machida,
Y.: The cuticle and cellular interactions. In BIOLOGY in THE PLANT CUTICLE,
ed. By Markus Riederer, Springer, pp311-332 (2005)
30. Takahashi, Y., Soyano,
T., Sasabe, M., and Machida, Y.: A MAP kinase cascade that controls plant
cytokinesis. J. Biochemistry 136,127-132 (2004)
29. Machida, C., Ueno,
Y. and Machida, Y.: Function of the ASYMMETRIC LEAVES1 and ASYMMETRIC
LEAVES2 genes in leaf development of Arabidopsis. Plant Morphology 15,
30-39 (2003)
28. Machida C., Iwakawa,
H., Ueno, Y., Semiarti, E., Tsukaya, H., Hasebe, M., Kojima, S. and Machida,
Y.: “Formation of a symmetric flat leaf lamina in Arabidopsis” in Morphogenesis
and Pattern Formation in Biological Systems: Experiments and Models (ed.
By Sekimura T., Noji, N., Ueno, N. and Maini, P.K.) published by Springer-Verlag 177-187
(2003)
27. Yoshihisa Ueno, Saeko
Kitakura, Shinji Terakura and Yasunori Machida: 6b gene: A New tool for
the elucidation of the growth and/or the differentiation of plant cells.
Web essay in the textbook Plant Physiology (3rd Ed. by Lincoln Taiz, http://www.plantphys.net/
article.php?ch=e&id=282&PHPSESSID=39b7ec2eedcc7546b5473a3687cd09a0
) (2002)
26. Kitakura, S., Fujita,
T., Azechi, Y., Ueno, Y., Terakura, S., Wabiko, H. and Machida, Y.: The
protein encoded by oncogene 6b from Agrobacterium tumefaciens interacts
with a nuclear-localized proteins in tobacco cells. In Endocytobiology
VIII 15, 170-180 (2004)
25. Ichimura, K., Tena,
G., Henry, Y., Zhang, S., Hirt, H., Wilson, C., Morris, P.C., Mundy,
J., Innes, R.W., Ecker, J.R., Scheel, D., Klessig, D.F., Machida, Y.,
Ohashi, Y., Ellis, B.E., Kleis, M., Sheen, J., Heberle-Bors, E., Walker,
J.C., and Shinozaki, K.: Protein kinases involved in mitogen-activated
protein (MAP) kinase cascade in plants. A proposed nomenclature of Arabidopsis
MAP kinase (MAPK), MAPK kinase (MAPKK) and MAPKK kinase (MAPKKK). Trend
in Plant Sci. 7: 301-308 (2002)
24. Nishihama, R., and
Machida, Y.: Expansion of the phragmoplast during plant cytokinesis:
a MAPK pathway may MAP it out. Curr Opin Plant Biol., 4: 507-512 (2001)
23. Machida, Y., Kitakura,
S., Fujita, T., Ueno, Y., Azechi, Y., and Wabiko, H.: Molecular mechanism
of phytohormone-independent growth of plant cells transformed with Agrobacterium
tumefaciens T-DNA gene 6b. Proceedings of The 2000 Korea-Japan Joint
Symposium 14: 139-141 (2000)
22. Machida, C., Onouchi,
H., Endang, S., Ishikawa, T. and Machida, Y.: Use of the R-RS site-specific
recombination system in plants. in Plant Molecular Biology Manual (ed.
by Gelvin, S.B.) published by Kluwer Academic Publishers (Netherland)
N2, 1-23 (2000)
21. Nishihama, R. and
Machida, Y.: The MAP kinase cascade that includes MAPKKK-related protein
kinase NPK1 controls a mitotic process in plant cells. in "Results and Problems
in Cell Differentiation", Vol. 27, Ed by Hirt, H.: MAP Kinases in Plant
Signal Transduction, Springer-Verlag Berlin Heidelberg, p119-p130 (1999)
20. Machida, Y., Onouchi,
H., Tanaka, H., Hamada, S., Ishikawa, T., Semiarti, E., Iwakawa, H.,
Nomura, K. and Machida., C.: The transposition pattern of the Ac element
and its use for targeted transposition in Arabidopsis thaliana. Proceedings
of The 1999 Korea-Japan Joint Symposium 13: 11-15 (1999)
19. 町田泰則：葉の形づくりに関わる遺伝子、「植物の生長：遺伝子から何が見えるか」、第
12 回「大学と科学」公開シンポジウム組織委員会編、クバプロ、p130-p137、1998
18. Machida, Y., Nishihama,
R. and Kitakura, S.: Progress in studies of plant homologs of mitogen-activated
protein (MAP) kinase and potential upstream components in kinase cascades.
Critical Reviews in Plant Sciences 16, 481-496 (1997)
17. Nishihama, R., Banno,
H., Shibata, W., Hirano, K., Nakashima, M., Usami, S. and Machida, Y.:
Plant homologues of components of MAPK (mitogen-activated protein kinase)
signal pathways in yeast and animal cells. Plant Cell Physiol. 36, 749-757
(1995)
16. Machida, Y., Onouchi,
H., Torikai, S., Kudo, M., Koizumi, J. and Machida, C: Use of site-specific
recombination systems for isolation of mutants of Arabidopsis thaliana:
the tagging/deletion strategy, in Modification of Gene Expression and Non-mendelian
Inheritance, (ed. by Oono, K. and Takaiwa, F.) published by NIAR and
STA (Tsukuba, Japan), p199-222 (1995)
15. Yoshioka, Y., Takahashi,
Y. Matsumoto, S., Kojima, S., Matsuoka, K., Nakamura, K., Oshima, K.,
Okada, N. and Machida, Y.: Mechanisms of T-DNA transfer and integration
into plant chromosomes. In Molecular mechanisms of bacterial virulence,
(ed. by C. Kado and J. Crosa) Kluwer Academic Publishers, Netherlands,
pp231-248 (1994)
14. Machida, Y., Shimoda,
N., Yamamoto-Toyoda, A., Takahashi, Y., Nishihama, R., Aoki, S., Matsuoka,
K., Nakamura, K., Yoshioka, Y., Ohba, T., and Obata, R. T. Molecular interactions
between Agrobacterium and plant cells. In Advances in molecular genetics
of plant-microbe interactions, (ed. by E. W. Nester) vol. 2, Kluwer Academic
Publishers, Netherlands, 85-96 (1993)
13. Hiroharu Banno, Toshiya
Muranaka, Yukihiro Ito, Toyoki Moribe, Shoji Usami, Kokichi Hinata and
Yasunori Machida: Isolation and characterization of cDNA clones that encode
protein kinases of Nicotiana tabacum. J. Plant Res., Special Issue 3,
181-192 (1993)
12. 町田千代子、尾之内均、町田泰則 (1992)
アグロバクテリウム T-DNA 転移を利用した植物遺伝子の解析、日本農芸化学会誌、67: 711-715
11. Machida Y., Okamoto
S., Matsumoto S., Usami S., Yamamoto A., Niwa Y., Jeong S. D., Nagamine
J., Shimoda N., Machida C. and Iwahashi M.: Mechanism of crown gall formation:
T-DNA transfer from Agrobacterium to plant cells. Bot. Mag. Tokyo 102,
331-350 (1989)
10. Machida Y., Okamoto
S., Usami S., Yamamoto A., Niwa Y., Jeong S. D., Shimoda N., Nagamine
J.: Mechanism of T-DNA transfer from Agrobacterium to plant cells. In
Interactions between plants and microorganisms, Proceedings of a JSPS-NUS
Inter-Faculty Seminar, Singapore, 77-89 (1989)
9. Machida Y., Okamoto
S., Usami S., Yamamoto A., Niwa Y., Jeong S. D., Nagamine J.: Mechanism
of T-DNA transfer from Agrobacterium to plant cells. In Plant Biotechnology
- Present and Future, Proceeding of the Int'l Symp at Gyeongsang Nat'l
University in Korea, 25-26 (1988)
8. Machida Y., Usami S.,
Yamamoto A., Niwa Y., Iwahashi M., Takebe I., Yanofsky M. F. and Nester
E. W.: Molecular Mechanism of Crown Gall Formation: T-DNA Transfer from
Agrobacterium tumefaciens to Plant Cells. In New Aspects of Plant Cell
Biology and Molecular Biology, Proceeding of The Oji International Seminar.
p141-144 (1986)
7. 町田泰則、町田千代子、大坪久子、大坪栄一
(1985) トランスポゾンがコードする遺伝子とその発現機構＝IS1 を中心にして＝、生化学、57: 296-312
6. 町田泰則、大坪久子、大坪栄一 (1982)
遺伝子上の特定部位に突然変異を導入する方法について— 特に遺伝子工学手法を用いて —、生物物理、22: 256-266
5. Ohtsubo E., Zenilman
M., Ohtubo H., McCormick M., Machida C. and Machida Y.: Mechanism of
Insertion and Cointegration Mediated by IS1 and Tn3. Cold Spring Harb.
Symp. Quant. Biol. 45, 283-295 (1980)
4. Okazaki T., Kurosawa
Y., Ogawa T., Seki Y., Shinozaki K., Hirose S., Fujiyama A., Machida
Y., Tamanoi F. and Hozumi T.: Structure and Metabolism of RNA Primer
in Discontinuous Replication of Prokaryotic DNA. Cold Spring Har. Sym.
Quant. Biol. 43, 203-219 (1978)
3. Tamanoi F., Machida
Y. and Okazaki T.: Uracil Incorporation into Nascent DNA of Bacillus
subtilis and Escherichia coli. Cold Spring Harb. Sym. Quant. Biol. 43,
239-242 (1978)
2. Okazaki R., Okazaki
T., Hirose S., Sugino A., Ogawa T., Kurosawa Y., Shinozaki K., Tamanoi
F., Seki T., Machida Y., Fujiyama A. and Kohara Y.: Discontinuous Replication
in Prokaryotic Systems, In DNA Synthesis and Its Regulation (M. Goulian
& P. Hanawalt, eds.) Vol. III (F. Fox, series ed.) ICN-UCLA Symposium
on Molecular and Cellular Biology, p. 832, W. A. Benjamin, California (1975)
1. Machida Y., Kohara Y., Hirose S., Okazaki R. and Okazaki T.: Discontinuous Replication of Both Strands of φX174 RF DNA. Proceeding of the Molecular Biology Meeting of Japan (1975)