Invited articles
42. Iwakawa, H.,Takahashi,
H., Machida, Y. and Machida, C.(2020). Roles of ASYMMETRIC LEAVES2(AS2) and
Nucleolar Proteins in the Adaxial-Abaxial Polarity Specification at the Perinucleolar
Region in Arabidopsis. Int. J. Mol. Sci. 2020, 21, 7314; 1-19
https://doi.org/10.3390/ijms21197314
41. Machida, C., Nakagawa,
A., Kojima, S., Takahashi, H. and Machida, Y. (2015). The complex of ASYMMETRIC
LEAVES (AS) proteins plays a central role in antagonistic interactions of
genes for leaf polarity specification in Arabidopsis. WIREs. Dev. Biol.
2015 Nov-Dec;4(6):655-671. Epub 2015 Jun 24. Review.
https://doi.org/10.1002/wdev.196
40. Ito, M. and Machida, Y. (2015). Reprogramming of plant cells induced
by 6b oncoproteins from the plant pathogen Agrobacterium. J. Plant Res.
128, 423-435. [Epub ahead of print on Feb 19, 2015].
https://doi.org/10.1007/s10265-014-0694-3
39. Ishibashi, N., Kitakura, S., Terakura, S., Machida, C. and Machida,
Y. (2014). Protein encoded by oncogene 6b from Agrobacterium tumefaciens
has reprogramming potential and histone chaperone-like activity. In Progress
of creal genome engineering mediated by Agrobacterium tumefaciens: Frontiers
in PLANT SCIENCE (ed. by Seiichiro Toki & Toshihiko Komari),
28 October 2014, vol. 5, Article 572, p1-7,
https://doi.org/10.3389/fpls.2014.00572
38. Sasabe, M. and Machida, Y. (2014). Signaling pathway that controls plant
cytokinesis. In Signalling Pathways in Plants: ed. by Yasunori Machida, Chentao
Lin & Fuyuhiko Tamanoi, THE ENZYMES, vol. 35, Burlington:
Academic Press, pp. 145-165.
https://doi.org/10.1016/B978-0-12-801922-1.00006-3
37. Sasabe, M. and Machida, Y. (2012). Regulation of Organization and Function
of Microtubules by the itogen-Activated Protein Kinase Cascade During Plant
Cytokinasis. Cytoskeleton 69(11), 913-918. Epub 2012 Oct 1.
https://onlinelibrary.wiley.com/doi/10.1002/cm.21072/full
36. Sasabe, M. and Machida, Y. (2008). Signaling by protein phosphorylation
in cell division. In Annual Plant Reviews, Vol. 33 (ed. by Zenbiyao
Yang, Blackwell) p336-361.
https://doi.org/10.1002/9781444302387.ch12
35. Suzuki, T. and Machida, Y. (2008). MAP kinase cascades controlling cell
division, plant growth and development. In Plant Growth Signaling, Plant
Cell Monographs (ed, Laci Bogre) Springer-Verlag Berlin Heidelberg,
p261-275.
https://link.springer.com/chapter/10.1007/7089_2007_153
34. Sasabe, M. and Machida, Y. (2007). MAP kinase signaling during M phase
progression. In Cell division Control in Plants. Plant Cell Monographs
(ed, D. P. S. Verma and Z. Hong) Springer-Verlag Berlin Heidelberg,
p233-250.
https://link.springer.com/chapter/10.1007/7089_2007_130
33. Sasabe, M. and Machida, Y. (2006). MAP65: a bridge linking a MAP kinase
to microtubule turnover. Curr. Opin. Plant Biol. 9, 563-570.
https://doi.org/10.1016/j.pbi.2006.09.010
32. Sasabe, M., Takahashi, Y., Soyano, T., Tanaka, H., Kousetsu, K., Suzuki,
T. and Machida, Y. (2006). The NACK-PQR MAP kinase cascade controls plant
cytokinesis. in Biotechnology in Agriculture and Forestry, Vol. 58, Tobacco
BY-2 Cells: From Cellular Dynamics to Omics (ed, Nagata, T. Matsuoka,
K. and Inze, D.) p79-94. Springer-Verlag Berlin Heidelberg.
https://link.springer.com/chapter/10.1007/3-540-32674-X_6
31. Tanaka, H. and Machida, Y. (2005). The cuticle and cellular interactions.
In BIOLOGY in THE PLANT CUTICLE, ed. By Markus Riederer,
Springer, pp311-332.
https://doi.org/10.1002/9780470988718.ch10
30. Takahashi, Y., Soyano, T., Sasabe, M. and Machida, Y. (2004). A MAP
kinase cascade that controls plant cytokinesis. J. Biochemistry 136,127-132.
https://academic.oup.com/jb/article-abstract/136/2/127/802200?redirectedFrom=fulltext
29. Kitakura, S., Fujita, T., Azechi, Y., Ueno, Y., Terakura, S., Wabiko,
H. and Machida, Y.: The protein encoded by oncogene 6b from Agrobacterium
tumefaciens interacts with a nuclear-localized proteins in tobacco cells.
In Endocytobiology VIII 15, 170-180 (2004)
28. Machida, C., Ueno,
Y. and Machida, Y. (2003). Function of the ASYMMETRIC LEAVES1 and ASYMMETRIC
LEAVES2 genes in leaf development of Arabidopsis. Plant Morphology 15,
30-39.
https://doi.org/10.5685/plmorphol.15.30
27. Machida, C., Iwakawa, H., Ueno, Y., Semiarti, E., Tsukaya, H., Hasebe,
M., Kojima, S. and Machida, Y. (2003). Formation of a symmetric flat leaf
lamina in Arabidopsis. in Morphogenesis and Pattern Formation in Biological
Systems: Experiments and Models (ed. By Sekimura T., Noji, N., Ueno,
N. and Maini, P.-K.) published by Springer-Verlag177-187.
https://link.springer.com/chapter/10.1007%2F978-4-431-65958-7_15
26. Ueno, Y., Kitakura, S., Terakura, S. and Machida, Y. (2002). 6b gene:
A New tool for the elucidation of the growth and/or the differentiation of
plant cells. Web essay in the textbook Plant Physiology (3rd
Ed. by Lincoln Taiz, http://www.plantphys.net/ article.php?ch=e&id=282&PHPSESSID=39b7ec2eedcc7546b5473a3687cd09a0
)
25. MAPK Group (Ichimura,
K., et al.) Ichimura, K., Shinozaki, K., Tena, G., Sheen, J., Henry, Y., Champion,
A., Kleis, M., Zhang, S., Hirt, H., Wilson, C., Heberle-Bors, E., Ellis,
B.-E., Morris, P.-C., Innes, R.-W., Ecker, J.-R., Scheel, D., Klessig, D.-F.,
Machida, Y., Mundy, J., Ohashi, Y. and Walker, J.-C. (2002). Mitogen-activated
protein kinase cascades in plants: a new nomenclature. Trend in Plant
Sci. 7: 301-308.
https://doi.org/10.1016/S1360-1385(02)02302-6
24. Nishihama, R., and Machida, Y. (2001). Expansion of the phragmoplast
during plant cytokinesis: a MAPK pathway may MAP it out. Curr Opin Plant
Biol. 4: 507-512.
https://doi.org/10.1016/S1369-5266(00)00208-9
23. Machida, Y., Kitakura, S., Fujita, T., Ueno, Y., Azechi, Y. and Wabiko,
H. (2000). Molecular mechanism of phytohormone-independent growth of plant
cells transformed with Agrobacterium tumefaciens T-DNA gene 6b. Proceedings
of The 2000 Korea-Japan Joint Symposium 14: 137-141.
22. Machida, C., Onouchi,
H., Semiarti, E., Ishikawa, T. and Machida, Y. (2000). Use of the R-RS site-specific
recombination system in plants. in Plant Molecular Biology Manual (ed.
by Gelvin, S.B.) published by Kluwer Academic Publishers (Netherland) N2,
1-23.
https://link.springer.com/chapter/10.1007/978-94-011-4217-5_6
21. Nishihama, R. and Machida, Y. (2000). The MAP kinase cascade that includes
MAPKKK-related protein kinase NPK1 controls a mitotic process in plant cells.
in Results and Problems in Cell Differentiation, Vol. 27, Ed by Hirt, H. MAP
Kinases in Plant Signal Transduction, Springer-Verlag Berlin
Heidelberg, p119-p130.
https://link.springer.com/chapter/10.1007%2F978-3-540-49166-8_9
20. Machida, Y., Onouchi, H., Tanaka, H., Hamada, S., Ishikawa, T., Semiarti,
E., Iwakawa, H., Nomura, K. and Machida. C. (1999). The transposition pattern
of the Ac element and its use for targeted transposition in Arabidopsis thaliana.
Proceedings of The 1999 Korea-Japan Joint Symposium 13: 11-15.
19. 町田泰則 (1998). 葉の形づくりに関わる遺伝子, 植物の生長：遺伝子から何が見えるか, 第 12 回「大学と科学」公開シンポジウム組織委員会編、クバプロ、p130-p137.
18. Machida, Y., Nishihama,
R. and Kitakura, S. (1997). Progress in studies of plant homologs of mitogen-activated
protein (MAP) kinase and potential upstream components in kinase cascades.
Critical Reviews in Plant Sciences. 16(6), 481-496.
https://doi.org/10.1080/07352689709701957
17. Nishihama, R., Banno, H., Shibata, W., Hirano, K., Nakashima, M., Usami,
S. and Machida, Y. (1995). Plant homologues of components of MAPK (mitogen-activated
protein kinase) signal pathways in yeast and animal cells. Plant Cell
Physiol. 36, 749-757.
https://doi.org/10.1093/oxfordjournals.pcp.a078818
16. Machida, Y., Onouchi, H., Torikai, S., Kudo, M., Koizumi, J. and Machida,
C. (1995). Use of site-specific recombination systems for isolation of mutants
of Arabidopsis thaliana: the tagging/deletion strategy, in Modification
of Gene Expression and Non-mendelian Inheritance (ed. by Oono, K.
and Takaiwa, F.) published by NIAR and STA (Tsukuba, Japan), p199-222.
15. Yoshioka, Y., Takahashi,
Y. Matsumoto, S., Kojima, S., Matsuoka, K., Nakamura, K., Oshima, K., Okada,
N. and Machida, Y. (1994). Mechanisms of T-DNA transfer and integration into
plant chromosomes : role of virB, virD4 and virE2 and a short interspersed
repetitive element (SINE) from tobacco. In Molecular mechanisms of bacterial
virulence (ed. by C. Kado and J. Crosa) Kluwer Academic Publishers,
Netherlands, pp231-248.
https://link.springer.com/chapter/10.1007/978-94-011-0746-4_17
14. Machida, Y., Shimoda, N., Yamamoto-Toyoda, A., Takahashi, Y., Nishihama,
R., Aoki, S., Matsuoka, K., Nakamura, K., Yoshioka, Y., Ohba, T. and Obata,
R.- T. (1993). Molecular interactions between Agrobacterium and plant cells.
In Advances in molecular genetics of plant-microbe interactions,
(ed. by E. W. Nester) vol. 2, Kluwer Academic Publishers, Netherlands, 85-96.
https://link.springer.com/chapter/10.1007/978-94-017-0651-3_9
13. Banno, H., Muranaka, T., Ito, Y., Moribe, T., Usami, S., Hinata, K.
and Machida, Y. (1993). Isolation and characterization of cDNA clones that
encode protein kinases of Nicotiana tabacum. J. Plant Res.,
Special Issue 3, 181-192.
12. 町田千代子, 尾之内均,
町田泰則 (1993). アグロバクテリウム T-DNA 転移を利用した植物遺伝子の解析, 日本農芸化学会誌,
67: 711-715
https://doi.org/10.1271/nogeikagaku1924.67.711
11. Machida, Y., Okamoto, S., Matsumoto, S., Usami, S., Yamamoto, A., Niwa,
Y., Jeong, S. - D., Nagamine, J., Shimoda, N., Machida, C. and Iwahashi, M.
(1989). Mechanism of crown gall formation: T-DNA transfer from Agrobacterium
to plant cells. Bot. Mag. Tokyo 102, 331-350.
https://doi.org/10.1007/BF02488571.pdf
10. Machida, Y., Okamoto, S., Usami, S., Yamamoto, A., Niwa, Y., Jeong,
S.- D., Shimoda, N. and Nagamine, J. (1989). Mechanism of T-DNA transfer
from Agrobacterium to plant cells. In Interactions between plants and microorganisms,
Proceedings of the JSPS-NUS Inter-Faculty Seminar, Singapore, 77-89.
(ISBN) 9810013280
9. Machida, Y., Okamoto, S., Usami, S., Yamamoto, A., Niwa, Y., Jeong, S.-D. and Nagamine, J. (1988). Mechanism of T-DNA transfer from Agrobacterium to plant cells. In Plant Biotechnology - Present and Future, Proceeding of the Int'l Symp at Gyeongsang Nat'l University in Korea, 25-26.
8. Machida, Y., Usami, S., Yamamoto, A., Niwa, Y., Iwahashi, M., Takebe, I., Yanofsky, M.- F. and Nester, E.- W. (1986). Molecular Mechanism of Crown Gall Formation: T-DNA Transfer from Agrobacterium tumefaciens to Plant Cells. In New Aspects of Plant Cell Biology and Molecular Biology, Proceeding of the Oji International Seminar. p141-144.
7. 町田泰則, 町田千代子, 大坪久子, 大坪栄一 (1985). トランスポゾンがコードする遺伝子とその発現機構＝IS1 を中心にして＝, 生化学, 57: 296-312.
6. 町田泰則, 大坪久子. 大坪栄一
(1982). 遺伝子上の特定部位に突然変異を導入する方法について— 特に遺伝子工学手法を用いて —, 生物物理,
22: 256-266.
https://doi.org/10.2142/biophys.22.256
5. Ohtsubo, E., Zenilman, M., Ohtubo, H., McCormick, M., Machida, C. and
Machida, Y. (1981). Mechanism of Insertion and Cointegration Mediated by IS1
and Tn3. Cold Spring Harb. Symp. Quant. Biol. 45, 283-295.
https://doi.org/10.1101/SQB.1981.045.01.041
4. Okazaki, T., Kurosawa, Y., Ogawa, T., Seki, Y., Shinozaki, K., Hirose,
S., Fujiyama, A., Machida, Y., Tamanoi, F. and Hozumi, T. (1979). Structure
and Metabolism of RNA Primer in Discontinuous Replication of Prokaryotic DNA.
Cold Spring Har. Sym. Quant. Biol. 43, 203-219.
https://doi.org/10.1101/SQB.1979.043.01.026
3. Tamanoi, F., Machida, Y. and Okazaki, T. (1978). Uracil Incorporation
into Nascent DNA of Bacillus subtilis and Escherichia coli. Cold Spring
Harb. Sym. Quant. Biol. 43, 239-242.
https://doi.org/10.1101/SQB.1979.043.01.029
2. Okazaki, R., Okazaki, T., Hirose, S., Sugino, A., Ogawa, T., Kurosawa,
Y., Shinozaki, K., Tamanoi, F., Seki, T., Machida, Y., Fujiyama, A. and Kohara,
Y. (1975). Discontinuous Replication in Prokaryotic Systems, In DNA Synthesis
and Its Regulation (M. Goulian & P. Hanawalt, eds.) Vol. III (F. Fox,
series ed.) ICN-UCLA Symposium on Molecular and Cellular Biology,
p. 832, W. A. Benjamin, California.
1. Machida, Y., Kohara,
Y., Hirose, S., Okazaki, R. and Okazaki, T. (1975). Discontinuous Replication
of Both Strands of φX174 RF DNA. Proceeding of the Molecular Biology
Meeting of Japan.