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2006`
Motoshi Suzuki, Naoya Toyoda N, Shin Takagi. Pulsed Irradiation Improves Target Selectivity of Infrared Laser-Evoked Gene Operator for Single-Cell Gene Induction in the Nematode C. elegans.PLoS ONE 9(1): e85783. 10.1371/journal.pone.0085783.(2014)
Daisuke Neki, Hisako Nakayama, Takashi Fujii, Haruko Matsui-Furusho, Yoichi Oda. Functional motifs composed of morphologically homologous neurons repeated in the hindbrain segments.The Journal of Neuroscience 34(9): 3291-3302; doi: 10.1523/JNEUROSCI.4610-13.(2014)

Watanabe T, Shimazaki T, Mishiro A, Suzuki T, Hirata H, Tanimoto M, Oda Y . Coexpression of auxiliary KvƒÀ2 subunits with Kv1.1 channels is required for developmental acquisition of unique firing properties of zebrafish Mauthner cells. Journal of Neurophysiology ;111(6):1153-64;DOI: 10.1152/jn.00596.2013.(2014)

Wu Yu-Wei, Tang Xiaofang, Arizono Misa, Bannai Hiroko, Shih Pei-Yu, Dembitskaya Yulia, Kazantsev Victor, Tanaka Mika, Itohara Shigeyoshi, Mikoshiba Katsuhiko, Semyanov Alexey. Spatiotemporal calcium dynamics in single astrocytes and its modulation by neuronal activity. Cell Calcium 55(2).119-29.(2014)

Arizono M, Bannai H, Mikoshiba K. Imaging mGluR5 dynamics in astrocytes using quantum dots.@Current Protocols in Neuroscience 66.2.21.1-18.(2014)

Miyamoto Akitoshi, Bannai Hiroko, Michikawa Takayuki, Mikoshiba Katsuhiko.Optimal microscopic systems for long-term imaging of intracellular calcium using a ratiometric genetically-encoded calcium indicator. J Biol Chem. 434(2)252-7(2013)
Sudo Y, Okazaki A, Ono H, Yagasaki J, Sugo S, Kamiya M, Reissig L, Inoue K, Ihara K, Kandori H, Takagi S, Hayashi S, Hirata H.A blue-shifted light-driven proton pump for neural silencing. J Biol Chem. 288.20624-20632 doi: 10.1074/jbc.M113.475533(2013)

Inoue M, Tanimoto M, Oda Y. The role of ear stone size in hair cell acoustic sensory transduction. Scientific Reports 3:2114. doi: 10.1038/srep02114.(2013)

Yamanaka I, Miki M, Asakawa K, Kawakami K, Oda Y, Hirata H. Glycinergic transmission and postsynaptic activation of CaMKII are required for glycine receptor clustering in vivo. Genes Cells. 18(3):211-224(2013)

Okazaki A, Takagi S. An optogenetic application of proton pump ArchT to C. elegans cells. Neurosci Res.75(1):29-34(2013)

Okazaki A, Sudo Y, Takagi S. Optical Silencing of C. elegans Cells with Arch Proton Pump.PLoS ONE 7(5): e35370. (2012)

Kohashi T, Nakata N, Oda Y. Effective sensory modality activating an escape triggering neuron switches during early development in zebrafish, J Neurosci. 32(17):5810-20.(2012)

Lyons-Warren A, Kohashi T, Mennerick S, Carlson B. Retrograde fluorescent labeling allows for targeted extracellular single-unit recording from identified neurons in vivo. The Journal of Visualized Experiments 76: e3921 (2013)

Takeuchi Y. Hori M. Oda Y. Lateralized kinematics of predation behavior in a Lake Tanganyika scale- eating cichlid fish.PLoS ONE7(1): e29272 (2012)

Nukazuka A, Tamaki S, Matsumoto K, Oda Y, Fujisawa H, Takagi S. A shift of the TOR adaptor from Rictor towards Raptor by semaphorin in C. elegans.Nat Commun.2:484.doi:10.1038/ncomms1495 (2011)

Hirata H. Takahashi M. Yamada K. and Ogino K.The biological role of the glycinergic synapse in early zebrafish motility. Neurosci. Res. 71(1):1-11.(2011)

Sawa Y, Takeuchi Y, Nakamura H.@Nest site selection and nesting biology of Rock Ptarmigan
Lagopus muta japonicus in Japan. Bird Study. 58(2):200-207.(2011)
Tanimoto M, Ota Y, Inoue M, Oda Y.@Origin of inner ear hair cells: morphological and functional differentiation from ciliary cells into hair cells in zebrafish inner ear.J Neurosci. 31(10):3784-94. (2011)

Takeuchi Y., Ochi H., Kohda M., Sinyinza D. and Hori M. A 20-year census of a rocky littoral fish community in Lake Tanganyika. Ecology of Freshwater Fish 19: 239-248.i2010j

Nakano Y, Fujita M, Ogino K, Saint-Amant L, Kinoshita T, Oda Y, Hirata H. Biogenesis of GPI-anchored proteins is essential for surface expression of sodium channels in zebrafish Rohon-Beard neurons to respond to mechanosensory stimulation. Development. 137: 1689-98.(2010)

Hirata H, Carta E, Yamanaka I., Harvey, R. J. and Kuwada, J. Y. Defective glycinergic transmission in zebrafish motility mutants. Front. Mol. Neurosci. 2(26):1-17. (2010)

Suzuki M. Kamei H, Yube S,Takagi S. Manipulating behaviors of targeted single cells in vivo by using IR-LEGO.Proceedings IEEE international symposium on Micro-NanoMechatronics and Human Science, MHS 2009 :326-331.(2009)

Hirata H. Zebrafish muscular disease models towards drug discovery. Expert Opin. Drug Discov. 4: 507-513.(2009)

Satou C, Kimura Y, Kohashi T, Horikawa K, Takeda H, Oda Y, Higashijima S. Functional role of a specialized class of spinal commissural inhibitory neurons during fast escapes in zebrafish.@J Neurosci. 29(21):6780-93. (2009)
Kamei Y, Suzuki M, Watanabe K, Fujimori K, Kawasaki T, Deguchi T, Yoneda Y, Todo T, Takagi S, Funatsu T, Yuba S.@LinksInfrared laser-mediated gene induction in targeted single cells in vivo.@Nat Methods. Jan;6(1):79-81.@(2009)@

Tanimoto M, Ota Y, Horikawa K, Oda Y.@Auditory input to CNS is acquired coincidentally with development of inner ear after formation of functional afferent pathway in zebrafish.@J Neurosci. 29(9):2762-7.@(2009)

Kohashi T, Oda Y.@Initiation of Mauthner- or non-Mauthner-mediated fast escape evoked by different modes of sensory input.@ J Neurosci.@28(42):10641-53. (2008)

Kodama K, Takagi S, Koga A. The Tol1 element of the medeka fish, a member of the hAT transposable element family, jumps in Caenorhabditis elegans. Heredity. 101, 222-227.(2008)
Nukazuka A, Fujisawa H, Inada T, Oda Y, Takagi S. Semaphorin controls epidermal morphogenesis by stimulating mRNA translation via eIF2alpha in Caenorhabditis elegans. Genes Dev. 22(8):1025-1036.(2008)
Suzuki M, Kamei Y,Yuba S, Takagi S. Application of IR-LEGO to heat shock mediated-gene induction in targeted single cells of C. elegans. Proceedings of the 2007 International Symposium on Micro-NanoMechatronics and Human Science,:139 - 144(2007)
Saint-Amant L, Sprague S. M., Hirata H, Li, Q, Cui W. W., Zhou W, Poudou O, Hume R. I., Kuwada, J. Y. The zebrafish ennui behavioral mutation disrupts acetylcholine receptor localization and motor axon stability. Dev. Neurobiol. 68:45-61.(2008)
Nakao F, Hudson ML, Suzuki M, Peckler Z, Kurokawa R, Liu Z, Gengyo-Ando K, Nukazuka A, Fujii T, Suto F, Shibata Y, Shioi G, Fujisawa H, Mitani S, Chisholm AD, Takagi S.@The PLEXIN PLX-2 and the ephrin EFN-4 have distinct roles in MAB-20/Semaphorin 2A signaling in Caenorhabditis elegans morphogenesis.@ Genetics.;176(3):1591-607. (2007)
Hirata H, Watanabe T, Hatakeyama J, Sprague S. M., Saint-Amant L, Nagashima A, Cui W. W, Zhou W. Kuwada J. Y. Zebrafish relatively-relaxed mutants have a ryanodine receptor defect, show slow swimming and provide a model of multi-minicore disease. Development 134: 2771-2781. (2007)
Liu Z, Nukazuka A, Takagi S.@Improved method for visualizing cells revealed dynamic morphological changes of ventral neuroblasts during ventral cleft closure of Caenorhabditis elegans.@Dev Growth Differ, 49, 49-59 (2007)
Oka S, Liu W, Masutani H, Hirata H, Shinkai Y, Yamada S, Yoshida T, Nakamura H, Yodoi J.@Impaired fatty acid utilization in thioredoxin binding protein-2 (TBP-2)-deficient mice: a unique animal model of Reye syndrome. FASEB J. 20: 121-123.(2006)
Zhou W, Saint-Amant L, Hirata H, Cui WW, Sprague SM, Kuwada JY. Non-sense mutations in the dihydropyridine receptor ƒÀ1 gene, CACNB1, paralyze zebrafish relaxed mutants. Cell Calcium 39(3): 227-236(2006)
 
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